BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F01SP1|AL425723
(777 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1771 1519 0.0
>3x_Contig1771
Length = 25932
Score = 1519 bits (765), Expect = 0.0
Identities = 773/775 (99%), Gaps = 1/775 (0%)
Strand = Plus / Plus
Query: 3 taatatcttggcttgtcttgacaattacggttgtttagtcttgtgatttttgcattggac 62
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 15908 taatatcttggcttgtcttgacaatt-cggttgtttagtcttgtgatttttgcattggac 15966
Query: 63 aacagttaagtcagctcacactaccagggttggagaatactcaaaagagaatattgaaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15967 aacagttaagtcagctcacactaccagggttggagaatactcaaaagagaatattgaaag 16026
Query: 123 atatgagtmaacaagtgtttcagctgaataacgcagtaacggtaactcaagaagaaatcg 182
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16027 atatgagtcaacaagtgtttcagctgaataacgcagtaacggtaactcaagaagaaatcg 16086
Query: 183 atcattggaatgaaaagttaagtgaattgtcacctgaagaaattatacgttgggctatcg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16087 atcattggaatgaaaagttaagtgaattgtcacctgaagaaattatacgttgggctatcg 16146
Query: 243 ttactttcccacatttatttcaaaccactgcgtttggcttaactgggttggctactatcg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16147 ttactttcccacatttatttcaaaccactgcgtttggcttaactgggttggctactatcg 16206
Query: 303 atatgctttctaagattaatcaaaatgaaacagaaccaatcgttccattaatatttattg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16207 atatgctttctaagattaatcaaaatgaaacagaaccaatcgttccattaatatttattg 16266
Query: 363 atacattgcaccatttccctcagacgttagagcttttgaaagtggtagaaactcggtatt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16267 atacattgcaccatttccctcagacgttagagcttttgaaagtggtagaaactcggtatt 16326
Query: 423 acaagccaagaggacagaatgtcaatgtatatcagccgaaagattgtggttcggagcaag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16327 acaagccaagaggacagaatgtcaatgtatatcagccgaaagattgtggttcggagcaag 16386
Query: 483 aatttgctgccaaatacggtgatttcttatgggatacagacgatgataaatacgatttcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16387 aatttgctgccaaatacggtgatttcttatgggatacagacgatgataaatacgatttcc 16446
Query: 543 tagtcaaggtggaacctgctcatagagcttataaggaattgcaagtgactgctgtattca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16447 tagtcaaggtggaacctgctcatagagcttataaggaattgcaagtgactgctgtattca 16506
Query: 603 ctggtagaagaaagagtcaaggtggtgcaaggtcgaatctgaaattcatcgaattggacg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16507 ctggtagaagaaagagtcaaggtggtgcaaggtcgaatctgaaattcatcgaattggacg 16566
Query: 663 aattcaatcatatcatcaagatcaacccgctagcgaactgggacttcaaccaagtgcaaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16567 aattcaatcatatcatcaagatcaacccgctagcgaactgggacttcaaccaagtgcaaa 16626
Query: 723 gttatatccgtgataataacgtaccttacaatgaattgctagatctaggataccg 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16627 gttatatccgtgataataacgtaccttacaatgaattgctagatctaggataccg 16681
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6186
Number of Sequences: 1807
Number of extensions: 6186
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 777
length of database: 10,358,551
effective HSP length: 16
effective length of query: 761
effective length of database: 10,329,639
effective search space: 7860855279
effective search space used: 7860855279
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)